chr3:38551373:C>G Detail (hg38) (SCN5A)

Information

Genome

Assembly Position
hg19 chr3:38,592,864-38,592,864 View the variant detail on this assembly version.
hg38 chr3:38,551,373-38,551,373

HGVS

Type Transcript Protein
RefSeq NM_000335.4:c.4999G>C NP_000326.2:p.Val1667Leu
NM_198056.2:c.4999G>C NP_932173.1:p.Val1667Leu
NM_001099404.1:c.4999G>C NP_001092874.1:p.Val1667Leu
Summary

MGeND

Clinical significance
Variant entry
GWAS entry
Disease area statistics Show details

Frequency

[No Data.]

Prediction

ClinVar

Clinical Significance Uncertain significance
Review star
Show details
Links
Type Database ID Link
Gene MIM 600163 OMIM
HGNC 10593 HGNC
Ensembl ENSG00000183873 Ensembl
NCBI NCBI
Gene Cards Gene Cards
OncoKB OncoKB
Type Database ID Link
Variant TogoVar
COSMIC
MONDO
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
Clinical significance Last evaluated Review status Condition Origin Links
Uncertain significance 2018-04-25 criteria provided, single submitter not provided germline Detail
CIViC
[No Data.]
DisGeNET
Score Disease name Description Source Pubmed Links
0.130 Congenital long QT syndrome NA CLINVAR Detail
0.335 long QT syndrome NA CLINVAR Detail
Annotation

Annotations

DescrptionSourceLinks
NM_000335.5(SCN5A):c.4996G>C (p.Val1666Leu) AND not provided ClinVar Detail
NA DisGeNET Detail
NA DisGeNET Detail

Overlapped Transcript Coordinates

Gene Transcript ID Exon Number Chromosome Start Stop Type Amino Mutation Transcript Position Links

Overlapped Transcript

Gene Transcript ID Chromosome Start Stop Links
Gene
-
dbSNP
rs199473293 dbSNP
Genome
hg38
Position
chr3:38,551,373-38,551,373
Variant Type
snv
Reference Allele
C
Alternative Allele
G
Genome browser